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भारतीय विज्ञान शिक्षा एवं अनुसंधान संस्थान कोलकाता

INDIAN INSTITUTE OF SCIENCE EDUCATION AND RESEARCH KOLKATA

... towards excellence in science

An Autonomous Institution, Under the Ministry of Education, Government of India

Saptarshi Pyne

Assistant Professor
Dept: Departement of Computational and Data Sciences (CDS)
E-mail: spyne [at] iiserkol.ac.in
Personal homepage: Click Here

Research Interest:
 

Saptarshi's research aims to identify the cause-effect relationships among the variables of any black-box system where we can measure the state of each individual variable independently but can not observe the interdependencies between the variables. Human brain for example; we can measure the state of each neuron individually but do not know which neuron triggers which other neuron. Examples of similar systems are biological cells, meteorological units, astrophysical entities, recommender engines, and financial securities markets.

Academic Background:

  1. PhD (Computer Science and Engineering), IIT Guwahati, 2020
  2. BTech (Computer Science and Engineering), Future Inst of Engg and Mgmt (West Bengal University of Technology), 2010
  3. Higher Secondary (Science), Krishnagar Collegiate School (West Bengal Council of Higher Secondary Education), 2006
  4. Secondary (All subjects), Krishnagar Collegiate School (West Bengal Board of Secondary Education), 2003

Positions:

  1. Assistant Professor, IISER Kolkata (current)
  2. Assistant Professor, Indian Institute of Technology Jodhpur (2023 - 2024)
  3. Postdoctoral Research Associate, University of Wisconsin-Madison (2020 - 2023)
  4. Programmer Analyst, Cognizant Technology Solutions Pvt Ltd (2010 - 2013)

Awards and Honors:

  1. Associate of the Year from Cognizant Technology Solutions Pvt Ltd (2012)

Selected Publications:

  1. Zhang, Shilu; Pyne, Saptarshi; Pietrzak, Stefan; Halberg, Spencer; McCalla, Sunnie Grace; Siahpirani, Alireza Fotuhi; Sridharan, Rupa and Roy, Sushmita. 2023."Inference of cell type-specific gene regulatory networks on cell lineages from single cell omic datasets." Nature Communications, 14, 1-25
  2. Pyne, Saptarshi and Anand, Ashish. 2021."Rapid Reconstruction of Time-varying Gene Regulatory Networks with Limited Main Memory." IEEE/ACM Transactions on Computational Biology and Bioinformatics, 18, 1608-1619

All Publications: Click Here